Information for motif5


Reverse Opposite:

p-value:1e-35
log p-value:-8.247e+01
Information Content per bp:1.765
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets98.1 +/- 59.7bp
Average Position of motif in Background134.7 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TGACGGCTCCCA
-----GCTCCG-

PH0140.1_Pknox1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGACGGCTCCCA
GGATTGACAGGTCNTT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGACGGCTCCCA--
----HTTTCCCASG

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGACGGCTCCCA
NTATTGACAGCTNNTT

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGACGGCTCCCA
GATATTGACAGCTGCGT

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGACGGCTCCCA
NTATTGACAGGTNNTN

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGACGGCTCCCA
-CNGTCCTCCC-

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGACGGCTCCCA-------
----ATTTCCCAGVAKSCY

PB0045.1_Myb_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGACGGCTCCCA-
NNNNTAACGGTTNNNAN

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGACGGCTCCCA
GTATTGACAGCTNNTT