Information for motif50


Reverse Opposite:

p-value:1e-9
log p-value:-2.288e+01
Information Content per bp:1.530
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets113.5 +/- 58.0bp
Average Position of motif in Background73.9 +/- 69.5bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTCACTCC-----
NNTTTTCACACCTTNNN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTCACTCC--
GTTTCACTTCCG

MA0009.1_T/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTCACTCC---
TTCACACCTAG

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTCACTCC--
ATCACCCCAT

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTCACTCC-
ATTAACACCT

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCACTCC--
ATCACCCCAT

MA0471.1_E2F6/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTCACTCC-
NCTTCCCGCCC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTCACTCC--
TTCCCGCCWG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTCACTCC
NYTTCCCGCC

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTCACTCC--
CNGTCACGCCAC