Information for motif6


Reverse Opposite:

p-value:1e-34
log p-value:-7.935e+01
Information Content per bp:1.687
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets95.1 +/- 49.0bp
Average Position of motif in Background58.8 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAGGCGCTTG
TGCGCAGGCGC---

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCGCTTG
CACAGN------

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGGCGCTTG
--GGCVGTTR

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCGCTTG
NNCAGGTGNN--

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CAGGCGCTTG
NNATTGACAGGTGCTT-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCGCTTG--
ATCCACAGGTGCGAAAA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGGCGCTTG
CACGCA----

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGGCGCTTG----
NNGTCGCGTGNCAC

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGGCGCTTG-----
TAAGCCACTTGAAATT

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCGCTTG
CTGCGCATGCGC---