Information for motif7


Reverse Opposite:

p-value:1e-32
log p-value:-7.585e+01
Information Content per bp:1.712
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets106.7 +/- 52.8bp
Average Position of motif in Background102.2 +/- 46.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGAGCTTCTAG
TGCTGTGATTT---

MA0160.1_NR4A2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTTCTAG
GTGACCTT----

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGAGCTTCTAG-----
CTAAGGTTCTAGATCAC

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGCTTCTAG-
NNNGTGACCTTTGNNN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGCTTCTAG
GCAGTGATTT---

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGCTTCTAG-
NNNNTGACCTTTNNNN

MA0071.1_RORA_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGAGCTTCTAG
-TGACCTTGAT-

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGCTTCTAG
CGGAGC------

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTGAGCTTCTAG
----GCTTCC--

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGAGCTTCTAG
NTGACCTTGA--