Information for motif1


Reverse Opposite:

p-value:1e-23
log p-value:-5.399e+01
Information Content per bp:1.628
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif16.15%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets108.2 +/- 51.2bp
Average Position of motif in Background96.3 +/- 54.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGAATATCTTT
-TGATTAAATTA

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAATATCTTT
GCAACCTCATTATNNNN

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTGAATATCTTT-
ATGGTTCAATAATTTTG

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAATATCTTT
NNNACCTCATTATCNTN

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTGAATATCTTT
NNTNTCATGAATGT----

PH0094.1_Lhx4/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTGAATATCTTT-
TAAACTAATTAGCTTTG

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGAATATCTTT
-AAGATATCCTT

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTGAATATCTTT-
CCTTAATNGNTTTT

PB0198.1_Zfp128_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGAATATCTTT---
-TGTATATATATACC

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAATATCTTT
NTTNTATGAATGTGNNC