Information for motif26


Reverse Opposite:

p-value:1e-18
log p-value:-4.321e+01
Information Content per bp:1.560
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif12.96%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets102.7 +/- 54.5bp
Average Position of motif in Background108.5 +/- 48.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0504.1_NR2C2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCTGSTCTC-
TGACCTCTGACCCCN

TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCTGSTCTC
TGACCTTTGACCTC

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCTGSTCTC
TGACCTTTGCCCTA

MA0484.1_HNF4G/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCTGSTCTC-
TGGACTTTGNNCTCN

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCTGSTCTC-
TGACCTTTGCCCTAN

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACCTCTGSTCTC--
TGGACTTTGNNCTNTG

MA0114.2_HNF4A/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACCTCTGSTCTC
CTGGACTTTGGACTC

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACCTCTGSTCTC
-CCTTTGAWGT-

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACCTCTGSTCTC
TGACCTTTGCCCCA

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACCTCTGSTCTC
TNCCTTTGATGT-