Information for motif3


Reverse Opposite:

p-value:1e-24
log p-value:-5.741e+01
Information Content per bp:1.719
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif8.61%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets104.7 +/- 68.3bp
Average Position of motif in Background154.1 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0482.1_Gata4/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGAAATAAGCTG
NNGAGATAAGA--

MA0035.3_Gata1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGAAATAAGCTG
ANAGATAAGAA-

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGAAATAAGCTG-----
--AAAWWTGCTGACWWD

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAAATAAGCTG
-NAGATAAGNN-

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAAATAAGCTG
-CAGATAAGGN-

MA0037.2_GATA3/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAAATAAGCTG
--AGATAAGA--

MA0036.2_GATA2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAAATAAGCTG--
NCAGATAAGAANNN

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAAATAAGCTG----
-TAAAAATGCTGACTT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAAATAAGCTG
NBWGATAAGR--

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAAATAAGCTG-
---NAHCAGCTGD