Information for motif46


Reverse Opposite:

p-value:1e-4
log p-value:-1.149e+01
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.63%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets89.9 +/- 51.1bp
Average Position of motif in Background88.1 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGTCCCGG----
ACCACTCTCGGTCAC

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGTCCCGG--
CTTCCNGGAA

MA0067.1_Pax2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTCCCGG
AGTCACGC

MA0470.1_E2F4/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCCGG--
NNTTCCCGCCC

MA0471.1_E2F6/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCCGG--
NCTTCCCGCCC

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGTCCCGG-
HACTTCCGGY

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGTCCCGG-
NYTTCCCGCC

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGTCCCGG--
GGTCCCGCCC

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGTCCCGG----
NNNNTGACCCGGCGCG

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTCCCGG
--TCCCCA