Information for motif24


Reverse Opposite:

p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.461
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif17.11%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif2.65%
Average Position of motif in Targets95.8 +/- 55.7bp
Average Position of motif in Background97.9 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0153.1_Prop1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---NCTWAWTTWA----
GNNTNTTAATTAATNCN

PH0173.1_Uncx/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---NCTWAWTTWA----
CATAATTAATTAACGCG

PH0136.1_Phox2b/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---NCTWAWTTWA----
CGGAATTAATTAATAGG

PH0093.1_Lhx3/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--NCTWAWTTWA-----
GAAATTAATTAAATAAT

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--NCTWAWTTWA-----
CGAATTAATTAAATACT

PH0011.1_Alx1_2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---NCTWAWTTWA----
NNNAATTAATTAANGNG

PH0101.1_Lmx1b/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--NCTWAWTTWA-----
NNAATTAATTAAAAANN

PH0128.1_Otp/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---NCTWAWTTWA----
CGTAATTAATTAATTGG

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---NCTWAWTTWA----
NNTNNTTAATTAATNCG

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--NCTWAWTTWA-----
CGAATTAATTAAAAACC