p-value: | 1e-6 |
log p-value: | -1.464e+01 |
Information Content per bp: | 1.567 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 6.83% |
Number of Background Sequences with motif | 2.9 |
Percentage of Background Sequences with motif | 1.34% |
Average Position of motif in Targets | 131.1 +/- 56.9bp |
Average Position of motif in Background | 93.7 +/- 22.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.09 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | RTACAGTCTGTA--- GVACAGNMTGTYCTB |
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MA0007.2_AR/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | RTACAGTCTGTA--- GNACANNNTGTTCTT |
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ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -RTACAGTCTGTA--- AGNACAGNCTGTTCTN |
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GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --RTACAGTCTGTA- VAGRACAKWCTGTYC |
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MA0113.2_NR3C1/Jaspar
Match Rank: | 5 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -RTACAGTCTGTA-- AGNACATTNTGTTCT |
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GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -RTACAGTCTGTA--- AGNACANNNTGTNCTN |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | RTACAGTCTGTA ---TWGTCTGV- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | RTACAGTCTGTA ---CTGTCTGG- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | RTACAGTCTGTA -VBSYGTCTGG- |
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POL002.1_INR/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | RTACAGTCTGTA ---NNNANTGA- |
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