Information for motif41


Reverse Opposite:

p-value:1e-5
log p-value:-1.258e+01
Information Content per bp:1.792
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif6.21%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets64.8 +/- 39.0bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCTTCTTTAGC
-GCTTCC-----

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTCTTCTTTAGC
NTNTTGTTGTTTGTN

MA0080.3_Spi1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCTTCTTTAGC
NCACTTCCTCTTTTN-

MA0081.1_SPIB/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCTTCTTTAGC
TTCCTCT-----

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTTCTTTAGC
NNTTTTTCTTATNT---

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------TTCTTCTTTAGC
GTATCTATTGTTCTTTA--

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TTCTTCTTTAGC
AANTTATTGTTCTNNA--

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TTCTTCTTTAGC
TAATTGTTCTAAAC-

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTTCTTTAGC
NNNNTTTTTTTTTNAAC

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTTCTTTAGC
GNATTTTTTTTTTGANC