Information for motif9


Reverse Opposite:

p-value:1e-17
log p-value:-3.985e+01
Information Content per bp:1.649
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif10.56%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets98.9 +/- 60.1bp
Average Position of motif in Background162.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CWCAGGCWTCCT
-CNAGGCCT---

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CWCAGGCWTCCT
CACAGN------

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CWCAGGCWTCCT
GGGGCCGAGGCCTG--

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CWCAGGCWTCCT
---AGGCCTAG-

MA0164.1_Nr2e3/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CWCAGGCWTCCT
--CAAGCTT---

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CWCAGGCWTCCT
-----GCTTCC-

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CWCAGGCWTCCT
-BCAGACWA---

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CWCAGGCWTCCT
NTNGCCTCAGGCNNN--

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CWCAGGCWTCCT-
-----CCTTCCTG

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CWCAGGCWTCCT
----GGCGCGCT