p-value: | 1e-11 |
log p-value: | -2.705e+01 |
Information Content per bp: | 1.854 |
Number of Target Sequences with motif | 16.0 |
Percentage of Target Sequences with motif | 7.41% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 105.2 +/- 57.8bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTAATAG- -CTAATKGV |
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PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTAATAG----- CCTTAATNGNTTTT |
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MA0132.1_Pdx1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTAATAG -CTAATT- |
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PB0155.1_Osr2_2/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCTAATAG---- ACTTGCTACCTACACC |
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PB0154.1_Osr1_2/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCTAATAG---- ACATGCTACCTAATAC |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTAATAG-- GTTAATGGCC |
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MA0125.1_Nobox/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTAATAG-- --TAATTGGT |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTAATAG GKTAATGR |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTAATAG NGCTN---- |
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PH0107.1_Msx2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCTAATAG------ ANCGCTAATTGGTCTNN |
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