Information for motif7


Reverse Opposite:

p-value:1e-26
log p-value:-6.143e+01
Information Content per bp:1.629
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif12.96%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets82.0 +/- 55.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAGTGTT
AGGTGTGAAM---

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGTGTGAGTGTT-
---TTAAGTGCTT

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTGAGTGTT
GAAAGTGAAAGT---

MA0508.1_PRDM1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGTGTGAGTGTT
AGAAAGTGAAAGTGA-

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTGAGTGTT--
GTGCGTGGGCGGGNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTGTGAGTGTT
TGCGTGGGYG--

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTGAGTGTT-
NNGCGTGTGTGCNGCN

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGTGTGAGTGTT---
GGNGCGNCTGTTNNN

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTGAGTGTT
AGGTGTTAAT---

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTGTGAGTGTT
NGCGTGGGCGGR