Information for motif17


Reverse Opposite:

p-value:1e-17
log p-value:-4.092e+01
Information Content per bp:1.806
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif6.74%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets126.2 +/- 55.3bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTCTGTCTGA----
NAGTTTCABTHTGACTNW

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TTCTGTCTGA
--CTGTCTGG

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTCTGTCTGA-----
NNTNNTGTCTGGNNTNG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTCTGTCTGA
TGCTGACTCA

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTCTGTCTGA
--TWGTCTGV

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCTGTCTGA
-GCTGTG---

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCTGTCTGA
TGCTGAGTCA

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTCTGTCTGA
TNNTGCTACTGTNNNN

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCTGTCTGA--
TGCTGASTCAGC

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTCTGTCTGA-
AWWNTGCTGAGTCAT