p-value: | 1e-21 |
log p-value: | -4.838e+01 |
Information Content per bp: | 1.691 |
Number of Target Sequences with motif | 29.0 |
Percentage of Target Sequences with motif | 8.76% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.97% |
Average Position of motif in Targets | 106.3 +/- 64.8bp |
Average Position of motif in Background | 58.9 +/- 30.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGCCTGYTT TWGTCTGV-- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTGCCTGYTT VBSYGTCTGG-- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGCCTGYTT CTGTCTGG-- |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTGCCTGYTT-- GGNGCGNCTGTTNNN |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGCCTGYTT--- NNTNNTGTCTGGNNTNG |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGCCTGYTT-- NNGCGTGTGTGCNGCN |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGCCTGYTT NNACTTGCCTT--- |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGCCTGYTT CTGTTCCTGG-- |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTGCCTGYTT TTGCGTGCVA |
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MA0006.1_Arnt::Ahr/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTGCCTGYTT -TGCGTG--- |
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