Information for motif23


Reverse Opposite:

p-value:1e-9
log p-value:-2.177e+01
Information Content per bp:1.909
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif18.42%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif2.94%
Average Position of motif in Targets105.3 +/- 48.7bp
Average Position of motif in Background108.1 +/- 38.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCCTT-
TGTTTACTTT

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCCTT-
TGTTTACTTT

MA0136.1_ELF5/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCTT
TACTTCCTT

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTTTCCTT--
ATTTCCTGTN

MA0148.3_FOXA1/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GTTTCCTT--
TCCATGTTTACTTTG

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCTT
TGTTTATTT

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCCTT----
CAGTTTCGNTTCTN

MA0593.1_FOXP2/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCCTT
TNTGTTTACTT

MA0047.2_Foxa2/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTTTCCTT---
TGTTTACTTAGG

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GTTTCCTT---
NNNTTTGTTTACTTTTN