Information for motif19


Reverse Opposite:

p-value:1e-11
log p-value:-2.614e+01
Information Content per bp:1.617
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif34.21%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif7.62%
Average Position of motif in Targets119.4 +/- 59.1bp
Average Position of motif in Background92.5 +/- 48.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAATACAC---
SSAATCCACANN

MA0479.1_FOXH1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAATACAC-
TCCAATCCACA

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TAATACAC
NNNTTTNTAATACNG

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAATACAC-
GTCATAAAAN

MA0040.1_Foxq1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAATACAC----
-AATAAACAATN

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAATACAC----
ANANNTGATACCCNATN

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TAATACAC--
AAAAATAACAAACGG

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAATACAC---
AAAGGTAATAAAATTT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAATACAC
TAATCCCN

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TAATACAC----
AATNTTGATACCCTATN