Information for motif26


Reverse Opposite:

p-value:1e-15
log p-value:-3.606e+01
Information Content per bp:1.690
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets91.4 +/- 51.5bp
Average Position of motif in Background128.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0040.1_Foxq1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-ATAAACAATAGT
AATAAACAATN--

MA0084.1_SRY/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ATAAACAATAGT
GTAAACAAT---

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----ATAAACAATAGT------
AATAAAGAACAATAGAATTTCA

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ATAAACAATAGT
AACAAACAACAAGAG-

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ATAAACAATAGT-
AAAGTAAACAAAAATT

MA0087.1_Sox5/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ATAAACAATAGT
--NAACAAT---

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--ATAAACAATAGT---
TAGTGAACAATAGATTT

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ATAAACAATAGT
AAATAAACA-----

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----ATAAACAATAGT
AAAAAGTAAACAAACAC

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----ATAAACAATAGT
CAAACGTAAACAAT---