Information for motif38


Reverse Opposite:

p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.447
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets77.9 +/- 47.5bp
Average Position of motif in Background102.4 +/- 41.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0481.1_FOXP1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTGTGTTTCA-----
CTTTGTTTACTTTTN

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTGTGTTTCA
AGTTTCAGTTTC-

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTGTTTCA--
NNNNTTTTTTTTTNAAC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGTGTTTCA
ACTTTCACTTTC-

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGTTTCA----
NNTTTTGTTTTGATNT

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTGTGTTTCA---
NNNNTTTGTTTACNNT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTGTGTTTCA
RSTTTCRSTTTC-

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTGTGTTTCA-
NNGTANTGTTTTNC

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGTTTCA
NNTGTGGTTT-

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGTGTTTCA----
TTTTTTTTCNNGTN