p-value: | 1e-20 |
log p-value: | -4.815e+01 |
Information Content per bp: | 1.625 |
Number of Target Sequences with motif | 62.0 |
Percentage of Target Sequences with motif | 28.70% |
Number of Background Sequences with motif | 11.5 |
Percentage of Background Sequences with motif | 7.42% |
Average Position of motif in Targets | 93.9 +/- 50.9bp |
Average Position of motif in Background | 82.8 +/- 46.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.13 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGTAACAG SCCTAGCAACAG |
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BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGTAACAG--- -NHAACBGYYV |
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MA0498.1_Meis1/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AGTAACAG-- NNNTGAGTGACAGCT |
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MA0510.1_RFX5/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------AGTAACAG- CTCCCTGGCAACAGC |
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MA0111.1_Spz1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTAACAG- AGGGTAACAGC |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTAACAG CCAGGAACAG |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTAACAG-- TGAGTGACAGSC |
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PB0119.1_Foxa2_2/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGTAACAG---- AAAAATAACAAACGG |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------AGTAACAG- CCGCATAGCAACGGA |
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PH0141.1_Pknox2/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTAACAG------ NNATTGACAGGTGCTT |
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