Information for motif26


Reverse Opposite:

p-value:1e-13
log p-value:-3.021e+01
Information Content per bp:1.507
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif21.36%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif3.30%
Average Position of motif in Targets131.6 +/- 47.3bp
Average Position of motif in Background104.1 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGCTBTTGTCW
CAGCTGTT----

MA0480.1_Foxo1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCTBTTGTCW
-TCCTGTTTACA

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTBTTGTCW
CCCCCTGCTGTG----

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTBTTGTCW
ACAGCTGTTV---

MA0521.1_Tcf12/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTBTTGTCW
NNGCAGCTGTT----

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGCTBTTGTCW
NCAGCTGCTG---

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCTBTTGTCW
AGCAGCTGCTNN--

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGCTBTTGTCW
CAGCTGNT----

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGCTBTTGTCW
TGCAGCTGTCCCT-

MA0500.1_Myog/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTBTTGTCW
NNGCAGCTGTC----