Information for motif10


Reverse Opposite:

p-value:1e-22
log p-value:-5.159e+01
Information Content per bp:1.738
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets83.7 +/- 59.9bp
Average Position of motif in Background192.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TTAAATKTTT---
NNNTTAATTGGTTTTT

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTAAATKTTT---
GNNTTAATTGGTTGTT

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTAAATKTTT---
NNNTTAATTGGTTTTN

PH0042.1_Hmx2/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAATKTTT--
ATTCNTTAATTGCTTGT

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAATKTTT--
ANNCATTAATTGCTNGN

PH0043.1_Hmx3/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAATKTTT--
ATTNNTTAATTGCTTGT

MA0063.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTAAATKTTT
TTAATTG---

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTAAATKTTT---
NNATNAATTGTTTNN

PH0172.1_Tlx2/Jaspar

Match Rank:9
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTAAATKTTT-
AANTTATTAATTAATTA

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTAAATKTTT---
NTNNTTAAGTGGTTANN