Information for motif11


Reverse Opposite:

p-value:1e-22
log p-value:-5.096e+01
Information Content per bp:1.806
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif9.06%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets104.8 +/- 51.2bp
Average Position of motif in Background138.0 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTKCAAG
ATTGCGCAAC

MA0102.3_CEBPA/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTKCAAG
NATTGTGCAAT

MA0505.1_Nr5a2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTKCAAG------
AAGTTCAAGGTCAGC

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGTKCAAG----
--NTCAAGGTCA

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTKCAAG----
AGGTCAAGGTCA

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTKCAAG----
--BTCAAGGTCA

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TGTKCAAG--
GGGCCGTGTGCAAAAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTKCAAG-
CTGTTCCTGG

MA0466.1_CEBPB/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTKCAAG-
ATTGTGCAATA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGTKCAAG-----
CTAAGGTTCTAGATCAC