Information for motif17


Reverse Opposite:

p-value:1e-19
log p-value:-4.557e+01
Information Content per bp:1.788
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif6.65%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets80.3 +/- 51.9bp
Average Position of motif in Background130.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0502.1_NFYB/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----GACCAATC--
AAATGGACCAATCAG

MA0060.2_NFYA/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GACCAATC--------
TGGACCAATCAGCACTCT

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GACCAATC--
AGCCAATCGG

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GACCAATC-
ACTAGCCAATCA

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GACCAATC-----
GAAGATCAATCACTTA

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GACCAATC-----
GAAGATCAATCACTAA

MA0070.1_PBX1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GACCAATC---
CCATCAATCAAA

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GACCAATC----
--CAAATCACTG

MA0087.1_Sox5/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACCAATC
NAACAAT-

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GACCAATC-
DGATCRATAN