Information for motif18


Reverse Opposite:

p-value:1e-19
log p-value:-4.557e+01
Information Content per bp:1.835
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif6.65%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets104.2 +/- 51.7bp
Average Position of motif in Background177.0 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0151.1_ARID3A/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TGAKTAAA
--ATTAAA

MA0099.2_JUN::FOS/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGAKTAAA
TGAGTCA-

PB0001.1_Arid3a_1/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TGAKTAAA----
GGGTTTAATTAAAATTC

MA0462.1_BATF::JUN/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGAKTAAA
GAAATGACTCA-

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGAKTAAA--
TGATTGATGA

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGAKTAAA
DATGASTCAT

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGAKTAAA-
ATGATGCAAT

PH0095.1_Lhx5/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TGAKTAAA----
CGAATTAATTAAATACT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAKTAAA--
AAAGTAAACA

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGAKTAAA
GATGAGTCAT