Information for motif19


Reverse Opposite:

p-value:1e-18
log p-value:-4.333e+01
Information Content per bp:1.766
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif8.16%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets119.5 +/- 44.9bp
Average Position of motif in Background100.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0508.1_PRDM1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCTBTCYCT
TCACTTTCACTTTCN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTBTCYCT
ACTTTCACTTTC-

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTBTCYCT
ACTTTCACTTTC-

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTTTCTBTCYCT
ANTCCTTTGTCTNNNN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTBTCYCT
RSTTTCRSTTTC-

MA0098.2_Ets1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTTTCTBTCYCT
CCCACTTCCTGTCTC-

MA0514.1_Sox3/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTBTCYCT
CCTTTGTTTT---

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTTTCTBTCYCT-
CTGTCTGTCACCT

MA0474.1_Erg/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCTBTCYCT
CCACTTCCTGT----

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTBTCYCT
ACTTCCTGTT---