Information for motif20


Reverse Opposite:

p-value:1e-18
log p-value:-4.262e+01
Information Content per bp:1.729
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets105.5 +/- 51.7bp
Average Position of motif in Background111.4 +/- 45.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:MAGAWTACAG-
-----CACAGN

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:MAGAWTACAG---
---ATGCCAGACN

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-MAGAWTACAG------
TCNCTTTACAGCGNNNT

ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MAGAWTACAG---
-AGGAAACAGCTG

POL002.1_INR/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:MAGAWTACAG----
------TCAGTCTT

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MAGAWTACAG---
-ACATCAAAGGNA

MA0523.1_TCF7L2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MAGAWTACAG---
AAAGATCAAAGGAA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:MAGAWTACAG-------
NNNANTGCAGTGCNNTT

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-MAGAWTACAG------
TCNNTTTACAGCGNNNT

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MAGAWTACAG-
-ACWTCAAAGG