Information for motif25


Reverse Opposite:

p-value:1e-15
log p-value:-3.606e+01
Information Content per bp:1.688
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets97.6 +/- 50.9bp
Average Position of motif in Background113.5 +/- 52.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCACTGTCAGC---
---SCTGTCARCACC

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCACTGTCAGC
----NCGTCAGC

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCACTGTCAGC--
CAATCACTGGCAGAAT

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCACTGTCAGC-
-TGAGTGACAGSC

MA0498.1_Meis1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCACTGTCAGC-
NNNTGAGTGACAGCT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCACTGTCAGC
NTGATTGACAGN

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCACTGTCAGC-
---TGAGTCAGCA

MA0078.1_Sox17/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCACTGTCAGC
CTCATTGTC---

MA0496.1_MAFK/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCACTGTCAGC-----
--CTGAGTCAGCAATTT

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCACTGTCAGC-
CTGTCTGTCACCT