Information for motif28


Reverse Opposite:

p-value:1e-14
log p-value:-3.411e+01
Information Content per bp:1.846
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif5.44%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets95.2 +/- 54.6bp
Average Position of motif in Background148.8 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------ACCCCTCTCC
NNNNTTGACCCCTNNNN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACCCCTCTCC
-CCCCCCCC-

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACCCCTCTCC-
GCCCCGCCCCC

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ACCCCTCTCC
NNGCACCTTTCTCC

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACCCCTCTCC---
TCGACCCCGCCCCTAT

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACCCCTCTCC
GCCCCGCCCC

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACCCCTCTCC---
CTATCCCCGCCCTATT

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACCCCTCTCC----
GAGCCCTTGTCCCTAA

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACCCCTCTCC-
TATCGACCCCCCACAG

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ACCCCTCTCC
NNCNTGACCCCGCTCT