Information for motif29


Reverse Opposite:

p-value:1e-14
log p-value:-3.372e+01
Information Content per bp:1.483
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif6.95%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets116.1 +/- 55.6bp
Average Position of motif in Background183.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TANGCATG----
TNNATTATGCATANNTT

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TANGCATG---
AAGGCAAGTGT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TANGCATG-
-AGGCCTNG

MA0507.1_POU2F2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TANGCATG-
TTCATTTGCATAT

MA0031.1_FOXD1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TANGCATG
GTAAACAT-

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TANGCATG
CTAGGCCT-

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TANGCATG-----
ACATTCATGACACG

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TANGCATG-
ATATGCAAAT

MA0069.1_Pax6/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TANGCATG----
TTCACGCATGAGTT

MA0480.1_Foxo1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TANGCATG-
TGTAAACAGGA