Information for motif3


Reverse Opposite:

p-value:1e-27
log p-value:-6.415e+01
Information Content per bp:1.663
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif8.46%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets99.8 +/- 49.5bp
Average Position of motif in Background97.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAKATATG--
NNTATTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAKATATG--
ANTATTACATGTANNNN

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAKATATG--
NNTTTTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAKATATG--
ANTNTTACATGTATNTA

MA0025.1_NFIL3/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTACAKATATG
ANGTTACATAA---

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAKATATG--
ANTTNTACATGTANTTN

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAKATATG--
ANTNNTACATGTANNTN

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATTACAKATATG
CCGTATTATAAACAA-

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTACAKATATG
ATTGCATAA---

MA0151.1_ARID3A/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTACAKATATG
ATTAAA------