Information for motif32


Reverse Opposite:

p-value:1e-13
log p-value:-3.143e+01
Information Content per bp:1.621
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif7.85%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets91.0 +/- 60.2bp
Average Position of motif in Background85.9 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCACAGCCA
NNNNTTGGGCACNNCN-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGGCACAGCCA-
-GGCCACACCCAN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGGCACAGCCA
--GCCACACCCA

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGGCACAGCCA
-GGCCACACCCA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGGCACAGCCA
CCAGGAACAG---

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGGGCACAGCCA
----CACAGN--

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGGGCACAGCCA-
CAGATGTGCACATACGT

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCACAGCCA
NTNTATGTGCACATNNN

MA0111.1_Spz1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGGCACAGCCA
AGGGTAACAGC--

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGGCACAGCCA---
AGCGGCACACACGCAA