Information for motif34


Reverse Opposite:

p-value:1e-12
log p-value:-2.918e+01
Information Content per bp:1.415
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets95.5 +/- 49.4bp
Average Position of motif in Background70.4 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TCCACACCTGCT
-CCTCACCTG--

MA0522.1_Tcf3/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TCCACACCTGCT-
--CACAGCTGCAG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TCCACACCTGCT
--NNCACCTGNN

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCCACACCTGCT----
CTCAGCAGCTGCTACTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCCACACCTGCT
-NNACAGCTGC-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCCACACCTGCT---
NNTNCGCACCTGTNGAN

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TCCACACCTGCT-
---ACAGCTGTTV

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCACACCTGCT-
---NCAGCTGCTG

MA0499.1_Myod1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCCACACCTGCT---
--TGCAGCTGTCCCT

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCACACCTGCT-
---ACAGCTGTTN