Information for motif36


Reverse Opposite:

p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.482
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets101.2 +/- 49.9bp
Average Position of motif in Background83.3 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATAACCCG-----
CNATAATCCGNTTNT

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATAACCCG-----
NNTAATCCNGNCNN

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATAACCCG-
-TAATCCCN

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATAACCCG-----
NNNATTAATCCGNTTNA

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATAACCCG
GCTAATCC-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATAACCCG
NBWGATAAGR--

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATAACCCG
NAGATAAGNN-

MA0040.1_Foxq1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATAACCCG--
AATAAACAATN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATAACCCG
AGATAASR--

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATAACCCG
CAGATAAGGN-