Information for motif44


Reverse Opposite:

p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.787
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.93%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets87.4 +/- 44.3bp
Average Position of motif in Background156.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AACAACCACAAA
--AAACCACANN

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AACAACCACAAA-
CAAACAACAACACCT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AACAACCACAAA-
-NWAACCACADNN

MA0511.1_RUNX2/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AACAACCACAAA----
-CAAACCACAAACCCC

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AACAACCACAAA-
--AAACCACAGAN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AACAACCACAAA
--AAACCACAGC

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AACAACCACAAA
-NAAACCACAG-

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AACAACCACAAA
NNNTAACAATTATAN-

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AACAACCACAAA
AGCAACAGCCGCACC

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AACAACCACAAA
ATGTCACAACAACAC-