Information for motif45


Reverse Opposite:

p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.450
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets97.2 +/- 48.3bp
Average Position of motif in Background95.5 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGCAGG
CACAGCTGCAG-

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGCTGCAGG
CAGCTGNT--

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGCAGG
CAGCAGCTGN---

MA0500.1_Myog/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGCAGG
GACAGCTGCAG-

MA0521.1_Tcf12/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGCAGG
AACAGCTGCAG-

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGCAGG
NNAGCAGCTGCT--

MA0524.1_TFAP2C/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGCAGG---
CATGGCCCCAGGGCA

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGCAGG
NNACAGCTGC---

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGCAGG
NATGTTGCAA-

MA0499.1_Myod1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTGCTGCAGG
NGNGACAGCTGCN--