Information for motif47


Reverse Opposite:

p-value:1e-3
log p-value:-9.018e+00
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.93%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets111.6 +/- 52.6bp
Average Position of motif in Background160.3 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCACTGTGTA--
NNNCCATTGTGTNAN

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCACTGTGTA
--GCTGTG--

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCACTGTGTA
---CTTTGT-

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCACTGTGTA---
CAATCACTGGCAGAAT

MA0078.1_Sox17/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCACTGTGTA
CTCATTGTC--

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCACTGTGTA-
---CTGTTTAC

MA0040.1_Foxq1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCACTGTGTA--
-TATTGTTTATT

MA0032.1_FOXC1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCACTGTGTA
--GGTAAGTA

Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCACTGTGTA-
GTAGGTCACTGGGTCA

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCACTGTGTA----
--NNTGTGGATTSS