Information for motif48


Reverse Opposite:

p-value:1e-3
log p-value:-9.018e+00
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.93%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets90.8 +/- 53.1bp
Average Position of motif in Background63.8 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCGCCCG--
-CTGCCCGCA

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTCGCCCG---
NNNGGGGCGCCCCCNN

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTCGCCCG--
ATAAGGGCGCGCGAT

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTCGCCCG----
AAGCATACGCCCAACTT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCGCCCG
-TCCCCA-

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GTCGCCCG--
ATAAAGGCGCGCGAT

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCGCCCG
AGCGCGCC--

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTCGCCCG----
NNGTCGCGTGNCAC

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-8
Orientation:reverse strand
Alignment:--------GTCGCCCG
TNAACGACGTCGNCCA

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTCGCCCG
CCTCCCGCCCN