Information for motif8


Reverse Opposite:

p-value:1e-23
log p-value:-5.466e+01
Information Content per bp:1.731
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif7.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets95.3 +/- 53.4bp
Average Position of motif in Background55.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGGCTCTGCTT-
--TGCTGTGATTT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGGCTCTGCTT-
---GCAGTGATTT

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGGGCTCTGCTT
CGAACAGTGCTCACTAT

MA0060.2_NFYA/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGGCTCTGCTT------
AGAGTGCTGATTGGTCCA

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTCTGCTT----
AATCGCACTGCATTCCG

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGGGCTCTGCTT
---GCTCCG---

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGGCTCTGCTT
--NGCTN-----

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCTCTGCTT
CNAGGCCT------

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGGGCTCTGCTT-
---GCTGTGGTTT

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGGGCTCTGCTT--
--GKVTCADRTTWC