Information for motif1


Reverse Opposite:

p-value:1e-32
log p-value:-7.506e+01
Information Content per bp:1.576
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif10.49%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets95.5 +/- 51.8bp
Average Position of motif in Background88.9 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGARCTGGGGAA
-----TGGGGA-

MA0081.1_SPIB/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGARCTGGGGAA
-----AGAGGAA

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGARCTGGGGAA
GGGGGCGGGGC-

MA0080.3_Spi1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGARCTGGGGAA----
-AAAAAGAGGAAGTGA

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGARCTGGGGAA----
--TTAAGAGGAAGTTA

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGARCTGGGGAA
-GGGGNGGGGC-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGARCTGGGGAA
--GGGGGGGG--

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GGARCTGGGGAA---
-----AGAGGAAGTG

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGARCTGGGGAA
GGCGGGGGCGGGGG-

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGARCTGGGGAA
GGGGGGGGGGGGGGA