Information for motif13


Reverse Opposite:

p-value:1e-19
log p-value:-4.412e+01
Information Content per bp:1.689
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif7.12%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets107.9 +/- 57.6bp
Average Position of motif in Background149.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGTAGAAAG------
--GGAGAAAGGTGCGA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATGTAGAAAG----
NNGATCTAGAACCTNNN

MA0442.1_SOX10/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATGTAGAAAG
----ACAAAG

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGTAGAAAG
NATGTTGCAA-

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGTAGAAAG-
AAGTAAACAAA

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGTAGAAAG
AAAGTAAACA-

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGTAGAAAG----
AAAATGTAAACAAACAG

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGTAGAAAG
AAAGTAAACA-

PB0096.1_Zfp187_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGTAGAAAG--
TTATGTACTAATAA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGTAGAAAG-
TATGTAAACANG