Information for motif14


Reverse Opposite:

p-value:1e-19
log p-value:-4.412e+01
Information Content per bp:1.605
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif7.12%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets90.4 +/- 58.3bp
Average Position of motif in Background72.5 +/- 43.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0479.1_FOXH1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGAATCCACAGG
TCCAATCCACA--

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGAATCCACAGG
SSAATCCACANN

MA0002.2_RUNX1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGAATCCACAGG-
--AAACCACAGAN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGAATCCACAGG
-NAAACCACAG-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGAATCCACAGG
--AAACCACAGC

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GGAATCCACAGG
------CACAGN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAATCCACAGG
--AAACCACANN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAATCCACAGG-
-NWAACCACADNN

MA0511.1_RUNX2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGAATCCACAGG----
-CAAACCACAAACCCC

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGAATCCACAGG
---ATCCAC---