Information for motif15


Reverse Opposite:

p-value:1e-18
log p-value:-4.252e+01
Information Content per bp:1.415
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif17.23%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif3.68%
Average Position of motif in Targets105.8 +/- 53.9bp
Average Position of motif in Background93.0 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR/Cell-Cycle-Exp/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-DBYTWCAGADVA
CGGTTTCAAA---

MA0036.2_GATA2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:DBYTWCAGADVA------
----NCAGATAAGAANNN

MA0037.2_GATA3/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:DBYTWCAGADVA--
------AGATAAGA

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:DBYTWCAGADVA
--CTYRAGTGSY

MA0035.3_Gata1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:DBYTWCAGADVA---
----ANAGATAAGAA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:DBYTWCAGADVA-
---TTGAGTGSTT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:DBYTWCAGADVA---
-----CAGATAAGGN

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:DBYTWCAGADVA---
-----NAGATAAGNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:DBYTWCAGADVA--
------AGATAASR

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------DBYTWCAGADVA
TTTTTTTTTTTTTTCAGGTT-