Information for motif19


Reverse Opposite:

p-value:1e-17
log p-value:-3.950e+01
Information Content per bp:1.711
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif8.24%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets97.1 +/- 53.6bp
Average Position of motif in Background92.3 +/- 50.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--KCGAWAVT
AATGGAAAAT

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----KCGAWAVT----
AAGATCGGAANTNNNA

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----KCGAWAVT--
CAAAATCGAAACTAA

MA0158.1_HOXA5/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:KCGAWAVT-
-CACTAATT

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----KCGAWAVT-----
CTGATCGAAACCAAAGT

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KCGAWAVT--
--GKTAATGR

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----KCGAWAVT---
CGTATCGAAACCAAA

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----KCGAWAVT
GAAAGTGAAAGT

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----KCGAWAVT--
ATAAACCGAAACCAA

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----KCGAWAVT---
TTGACCGAGAATTCC