Information for motif21


Reverse Opposite:

p-value:1e-16
log p-value:-3.779e+01
Information Content per bp:1.702
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif6.37%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets93.8 +/- 50.5bp
Average Position of motif in Background145.2 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTGTATTTASTC
---TGTTTATTT

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGTATTTASTC-
NNNNTTTGTTTACNNT

MA0481.1_FOXP1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGTATTTASTC---
CTTTGTTTACTTTTN

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTGTATTTASTC-
---TGTTTACTTT

PB0015.1_Foxa2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGTATTTASTC---
NNNTTTGTTTACTTTTN

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTGTATTTASTC-
---TGTTTACTTT

MA0593.1_FOXP2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGTATTTASTC
-TNTGTTTACTT

MA0047.2_Foxa2/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTGTATTTASTC---
---TGTTTACTTAGG

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGTATTTASTC---
NNNTTTGTTTACNTTNN

PH0062.1_Hoxb7/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGTATTTASTC---
GTAGTAATTAATGCAA