Information for motif22


Reverse Opposite:

p-value:1e-16
log p-value:-3.684e+01
Information Content per bp:1.450
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets132.1 +/- 54.6bp
Average Position of motif in Background93.0 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0514.1_Sox3/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CYTCTCTTTT
CCTTTGTTTT

MA0508.1_PRDM1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CYTCTCTTTT-
TCACTTTCACTTTCN

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CYTCTCTTTT------
--TTTTTTTTCNNGTN

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CYTCTCTTTT-----
NNNNTTTTTTTTTNAAC

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CYTCTCTTTT
ACTTTCACTTTC

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CYTCTCTTTT
TTCTTATCTGT-

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CYTCTCTTTT---
NNNTCCTTTGTTCTNNN

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CYTCTCTTTT---
TNNTCCTTTGTTCTNNT

MA0481.1_FOXP1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CYTCTCTTTT------
-CTTTGTTTACTTTTN

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CYTCTCTTTT------
-TTCTATTTTTAGNNN