Information for motif24


Reverse Opposite:

p-value:1e-16
log p-value:-3.684e+01
Information Content per bp:1.705
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets86.8 +/- 40.2bp
Average Position of motif in Background122.6 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCTACCCASTK
NAGCCCCGCCCCCN-

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCTACCCASTK
GCCCCGCCCC---

MA0039.2_Klf4/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTACCCASTK
GCCCCACCCA---

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCTACCCASTK
TGACCTTTGCCCTA--

MA0597.1_THAP1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTACCCASTK
--CTGCCCGCA-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTACCCASTK
CCCCCCCC----

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCTACCCASTK
CTATCCCCGCCCTATT

MA0493.1_Klf1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCTACCCASTK
GGCCACACCCA---

MA0504.1_NR2C2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTCTACCCASTK
TGACCTCTGACCCCN-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTCTACCCASTK
-HTTTCCCASG-