Information for motif25


Reverse Opposite:

p-value:1e-13
log p-value:-3.171e+01
Information Content per bp:1.790
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif5.62%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets116.2 +/- 50.8bp
Average Position of motif in Background144.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:KRTYTTCATTTW-
-ACTTTCACTTTC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:KRTYTTCATTTW-
-RSTTTCRSTTTC

MA0050.2_IRF1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---KRTYTTCATTTW------
TTTTACTTTCACTTTCACTTT

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:KRTYTTCATTTW----
NNCATTCATTCATNNN

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:KRTYTTCATTTW-
-ACTTTCGTTTCT

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-KRTYTTCATTTW--
TCAGTTTCATTTTCC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:KRTYTTCATTTW-
-AGTTTCAGTTTC

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:KRTYTTCATTTW-
-ACTTTCACTTTC

MA0508.1_PRDM1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-KRTYTTCATTTW--
TCACTTTCACTTTCN

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:KRTYTTCATTTW--
--GTTTCACTTCCG