Information for motif27


Reverse Opposite:

p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif7.12%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets91.3 +/- 49.5bp
Average Position of motif in Background151.7 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGCGCTGT-
---GCTGTG

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCTGT---
NTCGCGCGCCTTNNN

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGCGCTGT-------
AAGACGCTGTAAAGCGA

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCTGT---
ANCGCGCGCCCTTNN

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGCGCTGT-------
AGGACGCTGTAAAGGGA

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGCGCTGT----
GCCGCGCAGTGCGT

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCTGT----
NNTCCTGCTGTGNNN

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGCGCTGT
--NGCTN-

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCTGT----
TNTCCTGCTGTGNNG

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGCGCTGT----
TCNCCTGCTGNGNNN