Information for motif28


Reverse Opposite:

p-value:1e-13
log p-value:-3.131e+01
Information Content per bp:1.781
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif8.24%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets85.4 +/- 51.7bp
Average Position of motif in Background133.9 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---ACCGGGAG----
NNNACCGAGAGTNNN

PB0020.1_Gabpa_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ACCGGGAG-----
CAATACCGGAAGTGTAA

ETS(ETS)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACCGGGAG-
AACCGGAAGT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACCGGGAG-----
---GGGAGGACNG

MF0001.1_ETS_class/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACCGGGAG
ACCGGAAG

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACCGGGAG-
NACCGGAAGT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACCGGGAG--
ANCAGGATGT

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACCGGGAG-
AACCGGAAGT

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACCGGGAG-
ANCCGGAAGT

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACCGGGAG-
---CGGAGC