Information for motif32


Reverse Opposite:

p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets129.5 +/- 49.5bp
Average Position of motif in Background158.1 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0508.1_PRDM1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AAGGAAAAGT--
AGAAAGTGAAAGTGA

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAAAAGT
GAAAGTGAAAGT

MA0152.1_NFATC2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAGGAAAAGT
-TGGAAAA--

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAAAGT
GAAASYGAAASY

MA0136.1_ELF5/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAGGAAAAGT
AAGGAAGTA-

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGGAAAAGT
AATGGAAAAT-

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAAAAGT
NACAGGAAAT--

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAAAGT
GAAAGTGAAAGT

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGGAAAAGT--
ANGNAAAGGTCA

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGGAAAAGT
AVCAGGAAGT--