Information for motif33


Reverse Opposite:

p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.463
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets98.9 +/- 58.2bp
Average Position of motif in Background101.5 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---BNCCAMKC-
ACTAGCCAATCA

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:BNCCAMKC
TGCCAA--

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:BNCCAMKC--
AGCCAATCGG

MA0502.1_NFYB/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----BNCCAMKC--
AAATGGACCAATCAG

MA0060.2_NFYA/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--BNCCAMKC--------
TGGACCAATCAGCACTCT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:BNCCAMKC-
---CACGCA

POL002.1_INR/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:BNCCAMKC--
--TCAGTCTT

MA0130.1_ZNF354C/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:BNCCAMKC
ATCCAC--

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----BNCCAMKC----
NNAGTCCCACTCNNNN

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----BNCCAMKC----
ACTATGCCAACCTACC