Information for motif34


Reverse Opposite:

p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.891
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif22.10%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif9.01%
Average Position of motif in Targets88.9 +/- 54.5bp
Average Position of motif in Background99.4 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGAAA--
GAAAGTGAAAGT

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGTGAAA--
GAAAGTGAAAGT

MA0508.1_PRDM1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGGTGAAA----
AGAAAGTGAAAGTGA

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGTGAAA-
CGGAAGTGAAAC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGAAA--
GAAACTGAAACT

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGTGAAA---
-ACTGAAACCA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGTGAAA
AGGTGTCA

MA0050.2_IRF1/Jaspar

Match Rank:8
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------AGGTGAAA------
AAANNGAAAGTGAAAGTAAAN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGTGAAA--
GAAASYGAAASY

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGTGAAA--
AGGTGTTAAT