Information for motif37


Reverse Opposite:

p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.825
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif5.24%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets99.5 +/- 58.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:forward strand
Alignment:CGATCCAC
--ATCCAC

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGATCCAC---
SSAATCCACANN

MA0479.1_FOXH1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGATCCAC-
TCCAATCCACA

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGATCCAC
NTATYGATCH--

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGATCCAC-
---TCCCCA

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGATCCAC--------
TAAGCCACTTAACATT

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGATCCAC--------
TAAGCCACTTGAATTT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGATCCAC---
-AAACCACANN

MA0122.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGATCCAC----
---NCCACTTAN

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGATCCAC----
-AAACCACAGAN