Information for motif38


Reverse Opposite:

p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.675
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.87%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets76.5 +/- 47.3bp
Average Position of motif in Background147.8 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----TAAACATACA--
AAAGTAAACAAAAATT

MA0031.1_FOXD1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAAACATACA
GTAAACAT---

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TAAACATACA
AAATAAACA----

MA0593.1_FOXP2/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TAAACATACA
AAGTAAACAAA--

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------TAAACATACA-
AAAAAGTAAACAAACAC

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAAACATACA
TGTAAACA----

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TAAACATACA
NDGTAAACARRN-

MA0033.1_FOXL1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAAACATACA
TATACATA--

MA0481.1_FOXP1/Jaspar

Match Rank:9
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TAAACATACA
CAAAAGTAAACAAAG-

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------TAAACATACA-
AAAATGTAAACAAACAG