Information for motif39


Reverse Opposite:

p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.602
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets99.9 +/- 53.3bp
Average Position of motif in Background97.1 +/- 47.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAGAAGGC
CAGATAAGGN

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GAGAAGGC
-NGAAGC-

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAGAAGGC
NAGATAAGNN

MA0482.1_Gata4/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GAGAAGGC
NNGAGATAAGA-

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGAAGGC
NBWGATAAGR-

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GAGAAGGC-
GNNACCGAGAATNNN

MA0035.3_Gata1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGAAGGC
ANAGATAAGAA

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GAGAAGGC-
TTGACCGAGAATTCC

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GAGAAGGC---
TAAACTGATAAGAAGAT

MA0037.2_GATA3/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGAAGGC
AGATAAGA-