Information for motif6


Reverse Opposite:

p-value:1e-23
log p-value:-5.352e+01
Information Content per bp:1.626
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif11.61%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets99.3 +/- 56.5bp
Average Position of motif in Background82.6 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---BYTSCTGGGNCC
CCCCCTGCTGTG---

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:BYTSCTGGGNCC
--TGCTGACTCA

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:BYTSCTGGGNCC
---GCTGTG---

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--BYTSCTGGGNCC-
AAANTGCTGACTNAG

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---BYTSCTGGGNCC
TCNCCTGCTGNGNNN

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--BYTSCTGGGNCC
CACTTCCTGT----

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---BYTSCTGGGNCC
TNTCCTGCTGTGNNG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-BYTSCTGGGNCC
ATTTCCTGTN---

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-BYTSCTGGGNCC
ATTTCCTGTN---

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-BYTSCTGGGNCC
ATTTCCTG-----