Information for motif7


Reverse Opposite:

p-value:1e-22
log p-value:-5.066e+01
Information Content per bp:1.672
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets97.5 +/- 53.1bp
Average Position of motif in Background66.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0095.2_YY1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCATGTTVAGAA
GCNGCCATCTTG----

MA0052.2_MEF2A/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCATGTTVAGAA
NNGCTATTTTTAGCN

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCATGTTVAGAA----
AAAATGTAAACAAACAG

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCATGTTVAGAA
CTATTTTTGG--

MA0497.1_MEF2C/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCATGTTVAGAA-
TTCTATTTTTAGNNN

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCATGTTVAGAA
---TGTTTACA-

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCATGTTVAGAA----
AAAAAGTAAACAAAGAC

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCATGTTVAGAA-
CTAATATTGCTAAA

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCATGTTVAGAA---
-AATATTAATAAAGA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCATGTTVAGAA
KCTATTTTTRGH-