| p-value: | 1e-22 |
| log p-value: | -5.066e+01 |
| Information Content per bp: | 1.752 |
| Number of Target Sequences with motif | 21.0 |
| Percentage of Target Sequences with motif | 7.87% |
| Number of Background Sequences with motif | 1.1 |
| Percentage of Background Sequences with motif | 0.36% |
| Average Position of motif in Targets | 83.4 +/- 51.2bp |
| Average Position of motif in Background | 48.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.8 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 1 |
| Score: | 0.67
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TAAGTGCTGAGA
TTAAGTGCTT--- |
|
|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 2 |
| Score: | 0.65
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----TAAGTGCTGAGA
NTNNTTAAGTGGTTANN |
|
|
|
PH0117.1_Nkx3-1/Jaspar
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---TAAGTGCTGAGA--
TACTAAGTACTTAAATG |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TAAGTGCTGAGA
TTAAGTGGA---- |
|
|
|
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 5 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TAAGTGCTGAGA--
AAAWWTGCTGACWWD |
|
|
|
MA0496.1_MAFK/Jaspar
| Match Rank: | 6 |
| Score: | 0.61
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TAAGTGCTGAGA---
AAANTGCTGACTNAG |
|
|
|
PH0112.1_Nkx2-3/Jaspar
| Match Rank: | 7 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---TAAGTGCTGAGA-
CNTTAAGTACTTAANG |
|
|
|
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 8 |
| Score: | 0.60
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TAAGTGCTGAGA
CTAATKGV----- |
|
|
|
MA0495.1_MAFF/Jaspar
| Match Rank: | 9 |
| Score: | 0.59
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TAAGTGCTGAGA----
NAAAANTGCTGACTCAGC |
|
|
|
MA0063.1_Nkx2-5/Jaspar
| Match Rank: | 10 |
| Score: | 0.58
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TAAGTGCTGAGA
TTAATTG------ |
|
|
|
