Information for motif9


Reverse Opposite:

p-value:1e-22
log p-value:-5.066e+01
Information Content per bp:1.644
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets78.8 +/- 38.0bp
Average Position of motif in Background76.0 +/- 78.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0002.2_RUNX1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ARGHMCCMCAGA-
--AAACCACAGAN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ARGHMCCMCAGA-
-NWAACCACADNN

MA0511.1_RUNX2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ARGHMCCMCAGA----
-CAAACCACAAACCCC

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ARGHMCCMCAGA
--AAACCACAGC

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ARGHMCCMCAGA
--AAACCACANN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ARGHMCCMCAGA
-NAAACCACAG-

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ARGHMCCMCAGA---
AAGCCCCCCAAAAAT

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ARGHMCCMCAGA-
TATCGACCCCCCACAG

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ARGHMCCMCAGA--
NNNNGGTACCCCCCANN

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ARGHMCCMCAGA---
AGGAGACCCCCAATTTG