Information for motif1


Reverse Opposite:

p-value:1e-35
log p-value:-8.097e+01
Information Content per bp:1.617
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif15.74%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets109.1 +/- 55.0bp
Average Position of motif in Background27.5 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----GTGCCCAA----
GGGTGTGCCCAAAAGG

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------GTGCCCAA---
NTNTATGTGCACATNNN

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------GTGCCCAA---
NNGTATGTGCACATNNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GTGCCCAA---
GGGCCGTGTGCAAAAA

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GTGCCCAA---
CGAACAGTGCTCACTAT

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGCCCAA-
GTTGCGCAAT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGCCCAA-
HTTTCCCASG

MA0597.1_THAP1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGCCCAA-
CTGCCCGCA

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GTGCCCAA--------
NNTNGNNGTAACCAAGNNNNAGN

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTGCCCAA---
ACTAGCCAATCA