Information for motif12


Reverse Opposite:

p-value:1e-24
log p-value:-5.591e+01
Information Content per bp:1.612
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif15.28%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets107.1 +/- 44.9bp
Average Position of motif in Background53.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0481.1_FOXP1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGAAACACAAAA
CAAAAGTAAACAAAG--

MA0514.1_Sox3/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGAAACACAAAA-
---AAAACAAAGG

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGAAACACAAAA-
AAAGTAAACAAAAATT

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGAAACACAAAA-
-GAAACTGAAACT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAAACACAAAA
GTAAACAG----

MA0593.1_FOXP2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGAAACACAAAA
AAGTAAACAAA---

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAAACACAAAA-
-GAAAGTGAAAGT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAAACACAAAA
-AAACCACANN-

MA0157.1_FOXO3/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGAAACACAAAA
TGTAAACA-----

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGAAACACAAAA
NDGTAAACARRN--