Information for motif14


Reverse Opposite:

p-value:1e-24
log p-value:-5.591e+01
Information Content per bp:1.630
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif15.28%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets96.7 +/- 55.6bp
Average Position of motif in Background102.9 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0097.1_Lhx6_2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCA-----
NNNCGCTAATTAGNNGA

PH0098.1_Lhx8/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCA-----
CACCGCTAATTAGNNGN

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GCTAATCA-----
CACCGCTAATTAGCGGT

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCTAATCA
NCTAATTA

PH0096.1_Lhx6_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GCTAATCA-----
GAGCGTTAATTAATGTA

PB0031.1_Hoxa3_1/Jaspar

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GCTAATCA--
TGGAGGTAATTAAC

PH0036.1_Gsx2/Jaspar

Match Rank:7
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCA----
NTNNGCTAATTANCNT

PH0131.1_Pax4/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCA-----
NNGNGCTAATTAGNTNA

PH0016.1_Cux1_1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCTAATCA------
TNAGNTGATCAACCGGT

PH0045.1_Hoxa1/Jaspar

Match Rank:10
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCTAATCA----
CTGAGCTAATTACCGT