| p-value: | 1e-24 |
| log p-value: | -5.591e+01 |
| Information Content per bp: | 1.911 |
| Number of Target Sequences with motif | 33.0 |
| Percentage of Target Sequences with motif | 15.28% |
| Number of Background Sequences with motif | 2.1 |
| Percentage of Background Sequences with motif | 1.34% |
| Average Position of motif in Targets | 111.7 +/- 62.1bp |
| Average Position of motif in Background | 86.8 +/- 47.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.03 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0503.1_Nkx2-5_(var.2)/Jaspar
| Match Rank: | 1 |
| Score: | 0.81
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GAGTGGCT
CTTGAGTGGCT |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 2 |
| Score: | 0.79
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGTGGCT
TTGAGTGSTT |
|
|
|
MA0122.1_Nkx3-2/Jaspar
| Match Rank: | 3 |
| Score: | 0.75
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --GAGTGGCT
TTAAGTGGA- |
|
|
|
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
| Match Rank: | 4 |
| Score: | 0.74
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---GAGTGGCT
CTYRAGTGSY- |
|
|
|
PH0171.1_Nkx2-1/Jaspar
| Match Rank: | 5 |
| Score: | 0.72
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GAGTGGCT--
AANTTCAAGTGGCTTN |
|
|
|
PH0113.1_Nkx2-4/Jaspar
| Match Rank: | 6 |
| Score: | 0.71
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GAGTGGCT--
AATTTCAAGTGGCTTN |
|
|
|
POL004.1_CCAAT-box/Jaspar
| Match Rank: | 7 |
| Score: | 0.70
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GAGTGGCT---
TGATTGGCTANN |
|
|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 8 |
| Score: | 0.70
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GAGTGGCT
TTAAGTGCTT |
|
|
|
PH0115.1_Nkx2-6/Jaspar
| Match Rank: | 9 |
| Score: | 0.70
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GAGTGGCT--
AATNTTAAGTGGNTNN |
|
|
|
PH0114.1_Nkx2-5/Jaspar
| Match Rank: | 10 |
| Score: | 0.69
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------GAGTGGCT--
AAATTCAAGTGGNTTN |
|
|
|
