Information for motif16


Reverse Opposite:

p-value:1e-23
log p-value:-5.522e+01
Information Content per bp:1.793
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif12.04%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets103.5 +/- 59.1bp
Average Position of motif in Background106.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGTGG-----
NTNNTTAAGTGGNTNAN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTAGGTGG--
--AGGTGTCA

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGTGG-----
NTNNTTAAGTGGTTANN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTAGGTGG-
NNCAGGTGNN

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGTGG----
AATNTTAAGTGGNTNN

MA0009.1_T/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTAGGTGG---
CTAGGTGTGAA

MA0103.2_ZEB1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTAGGTGG--
-CAGGTGAGG

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGTGG----
AAATTCAAGTGGNTTN

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTAGGTGG----
ATTTTNGGGGGGCNN

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTAGGTGG------
GCGGAGGTGTCGCCTC