Information for motif17


Reverse Opposite:

p-value:1e-22
log p-value:-5.219e+01
Information Content per bp:1.538
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif11.57%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets109.6 +/- 62.0bp
Average Position of motif in Background84.4 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-AATCAATTAG
TAATCAATTA-

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AATCAATTAG---
AAAAACCAATTAAGAA

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AATCAATTAG---
AACAACCAATTAATTC

PH0147.1_Pou3f2/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---AATCAATTAG----
GATAATTAATTAGTTTG

PH0038.1_Hlx/Jaspar

Match Rank:5
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---AATCAATTAG--
TGTAATTAATTATGG

PH0149.1_Pou3f4/Jaspar

Match Rank:6
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AATCAATTAG---
AATTAATTAATTAATTC

PH0142.1_Pou1f1/Jaspar

Match Rank:7
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----AATCAATTAG---
GATTAATTAATTAAGTC

PH0088.1_Isl2/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---AATCAATTAG---
CAAAATCAATTAATTT

MA0135.1_Lhx3/Jaspar

Match Rank:9
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-AATCAATTAG--
AAATTAATTAATC

PH0146.1_Pou3f1/Jaspar

Match Rank:10
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AATCAATTAG---
AATTAATTAATTAATTC